Structural genome variation in rat genome(s)

Rat CNVs called by three different experimental and computational methods

See Distribution and functional impact of DNA copy number variation in the rat ( Nat.Genet. 2008 40(5):538-545 [Pubmed] ) for details.

Following platforms were used:

WGS coverage analysis browse CNVs
aCGH using Nimblegen RN34_WG arrays browse CNVs
aCGH using Affymetrix RaEx arrays browse CNVs

Optical and paired-end maps of BN, BN-Lx and SHR rats

Browse RGSC 3.4 genome assembly